Basic Information
Locus ID:
gene:TRIDC1AG055520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein of unknown function (DUF3675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 550144663 | 550146014 | + | gene:TRIDC1AG055520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 28,113.08 Da | 46.89 | 90.31 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 58 | 103 | 1.52358E-16 | - |
| Pfam | PF12906 | RING-variant domain | 58 | 103 | 1.5E-11 | IPR011016 |
| Pfam | PF12428 | Protein of unknown function (DUF3675) | 109 | 213 | 3.6E-25 | IPR022143 |
| SUPERFAMILY | SSF57850 | RING/U-box | 57 | 108 | 1.43E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 109 | 2.6E-17 | IPR013083 |
| SMART | SM00744 | ringv_2 | 57 | 104 | 1.7E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 50 | 110 | 19.71143 | IPR011016 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01275.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_037425174.1 | E3 ubiquitin-protein ligase MARCHF2-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B5Y621 | RING-CH-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG055520.