Basic Information
Locus ID:
gene:TRIDC1AG055130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 548924626 | 548933635 | + | gene:TRIDC1AG055130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 139,667.88 Da | 49.14 | 73.64 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 653 | 812 | 1.55753E-26 | - |
| CDD | cd12108 | Hr-like | 305 | 433 | 1.44475E-18 | - |
| CDD | cd12108 | Hr-like | 49 | 177 | 1.3056E-30 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1121 | 1164 | 1.34323E-17 | - |
| Pfam | PF13639 | Ring finger domain | 1121 | 1163 | 7.8E-7 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 302 | 434 | 2.0E-7 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1169 | 1226 | 4.5E-23 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 52 | 179 | 2.3E-13 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 651 | 813 | 6.0E-7 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 993 | 1068 | 6.3E-18 | IPR008913 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1120 | 1168 | 7.39E-8 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1059 | 1114 | 1.83E-15 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 984 | 1049 | 1.44E-18 | IPR037274 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 304 | 451 | 5.8E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1115 | 1166 | 5.6E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 44 | 197 | 3.4E-31 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1192 | 1233 | 7.5E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 648 | 875 | 2.0E-24 | - |
| SMART | SM00184 | ring_2 | 1122 | 1163 | 8.9E-5 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1058 | 1121 | 30.069431 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1122 | 1164 | 11.087743 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 986 | 1055 | 25.757315 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 577 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 577 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 906 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_037425114.1 | zinc finger protein BRUTUS-like [Triticum dicoccoides] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y5G3 | Zinc finger protein BRUTUS OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG055130.