Basic Information
Locus ID:
gene:TRIDC1AG053410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 542634703 | 542638621 | - | gene:TRIDC1AG053410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 87,603.65 Da | 42.82 | 85.66 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 347 | 432 | 1.28152E-23 | - |
| CDD | cd00028 | B_lectin | 33 | 154 | 7.73237E-28 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 504 | 769 | 3.45525E-89 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 215 | 328 | 1.4E-25 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 358 | 416 | 1.8E-15 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 501 | 764 | 1.9E-48 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 78 | 182 | 7.2E-35 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 767 | 1.35E-75 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 64 | 220 | 7.72E-28 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 22 | 153 | 3.7E-21 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 775 | 1.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 572 | 5.9E-31 | - |
| SMART | SM00473 | ntp_6 | 359 | 431 | 4.9E-6 | IPR003609 |
| SMART | SM00108 | blect_4 | 27 | 156 | 3.7E-35 | IPR001480 |
| SMART | SM00220 | serkin_6 | 498 | 765 | 6.4E-31 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 792 | 1.5E-271 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 351 | 433 | 10.570202 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 770 | 36.159733 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 27 | 152 | 19.281986 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 617 | 629 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 504 | 527 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037457202.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum dicoccoides] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7K3Z9 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG053410.