Basic Information
Locus ID:
gene:TRIDC1AG052430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 538473279 | 538475890 | - | gene:TRIDC1AG052430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 88,605.89 Da | 31.57 | 83.47 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 45 | 155 | 5.1029E-19 | IPR001480 |
| CDD | cd00053 | EGF | 280 | 308 | 2.16532E-5 | - |
| CDD | cd01098 | PAN_AP_plant | 329 | 411 | 2.03026E-17 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 249 | 308 | 1.7E-8 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 517 | 788 | 2.0E-49 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 344 | 389 | 2.7E-5 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 80 | 169 | 1.1E-18 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 490 | 791 | 9.04E-72 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 67 | 202 | 2.62E-23 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 154 | 7.0E-16 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 802 | 3.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 481 | 588 | 1.2E-29 | - |
| SMART | SM00181 | egf_5 | 280 | 320 | 0.0049 | IPR000742 |
| SMART | SM00473 | ntp_6 | 335 | 410 | 0.0027 | IPR003609 |
| SMART | SM00108 | blect_4 | 35 | 155 | 3.9E-16 | IPR001480 |
| SMART | SM00220 | serkin_6 | 514 | 803 | 2.7E-28 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 804 | 1.3E-205 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 330 | 411 | 8.2061 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 514 | 803 | 35.933586 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 21 | 152 | 14.729635 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 520 | 542 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_037423926.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6A183 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG052430.