Basic Information
Locus ID:
gene:TRIDC1AG051720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 534015917 | 534020344 | - | gene:TRIDC1AG051720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 43,712.13 Da | 34.63 | 82.56 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 94 | 123 | 0.03 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 256 | 292 | 0.048 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 7 | 294 | 2.24E-47 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 5 | 230 | 1.8E-31 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 231 | 320 | 6.6E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 252 | 292 | 0.0011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 211 | 249 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 84 | 123 | 1.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 126 | 165 | 0.031 | IPR001680 |
| SMART | SM00320 | WD40_4 | 42 | 81 | 0.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 207 | 66.0 | IPR001680 |
| PIRSF | PIRSF038169 | WD_rpt_55 | 1 | 402 | 2.7E-116 | IPR017422 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 92 | 132 | 8.904377 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 267 | 294 | 8.703868 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 279 | 293 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 110 | 124 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 402 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34260.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037423491.1 | WD repeat-containing protein 55-like [Triticum dicoccoides] | 0 |
| O80775 | WD repeat-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=WDR55 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B5Y570 | WD repeat-containing protein 55 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG051720.