Basic Information
Locus ID:
gene:TRIDC1AG045270
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 500322872 | 500328065 | - | gene:TRIDC1AG045270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 103,915.51 Da | 28.36 | 91.76 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 638 | 902 | 5.72805E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 4.3E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 636 | 899 | 1.4E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 393 | 3.23E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 618 | 907 | 5.19E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 916 | 5.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 707 | 1.4E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 420 | 1.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 184 | 6.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 284 | 8.5E-18 | IPR032675 |
| SMART | SM00220 | serkin_6 | 632 | 905 | 1.3E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 905 | 38.689716 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 266 | 288 | 7.280716 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 751 | 763 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 660 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 945 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037419332.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Triticum dicoccoides] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y489 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG045270.