Basic Information
Locus ID:
gene:TRIDC1AG043530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK13
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 490177533 | 490182172 | - | gene:TRIDC1AG043530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 60,961.69 Da | 43.44 | 82.67 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 76 | 334 | 9.27293E-132 | - |
| Pfam | PF13499 | EF-hand domain pair | 453 | 516 | 8.2E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 77 | 335 | 3.3E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 381 | 441 | 1.2E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 342 | 6.2E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 359 | 528 | 1.77E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 163 | 343 | 6.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 162 | 5.4E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 344 | 519 | 1.5E-53 | - |
| SMART | SM00220 | serkin_6 | 77 | 335 | 7.1E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 418 | 446 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 454 | 482 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 490 | 518 | 6.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 382 | 410 | 1.4E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 378 | 413 | 16.18713 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 450 | 485 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 335 | 46.237274 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 486 | 521 | 14.792358 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 391 | 403 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 197 | 209 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 499 | 511 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 106 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 463 | 475 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037418819.1 | calcium-dependent protein kinase 16-like [Triticum dicoccoides] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Y399 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG043530.