Basic Information
Locus ID:
gene:TRIDC1AG043160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 488037297 | 488045439 | - | gene:TRIDC1AG043160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 164,009.97 Da | 46.96 | 86.69 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1173 | 1499 | 4.6E-70 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 118 | 533 | 1.06E-31 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1123 | 1499 | 8.76E-85 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 113 | 537 | 3.4E-42 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1402 | 1499 | 9.4E-24 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1072 | 1293 | 1.8E-39 | - |
| SMART | SM00119 | hect_3 | 1137 | 1499 | 7.5E-63 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1148 | 1499 | 55.49831 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 884 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 884 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037418799.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum dicoccoides] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Y335 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG043160.