Basic Information
Locus ID:
gene:TRIDC1AG042610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 485310677 | 485313851 | + | gene:TRIDC1AG042610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 26,830.13 Da | 61.30 | 75.47 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 85 | 236 | 2.79508E-66 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 86 | 234 | 2.8E-51 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 80 | 239 | 1.84E-59 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 78 | 243 | 1.5E-64 | IPR016135 |
| SMART | SM00212 | ubc_7 | 84 | 241 | 1.0E-71 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 81 | 241 | 56.179962 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 155 | 170 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 80 | - | - |
| Coils | Coil | Coil | 218 | 238 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59300.1 | ubiquitin carrier protein 7. ubiquitin conjugating enzyme E2 | 0 |
| RefSeq | XP_037418593.1 | ubiquitin-conjugating enzyme E2 7-like [Triticum dicoccoides] | 0 |
| Q42540 | Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 SV=1 | 0 | |
| TrEMBL | W4ZSH7 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG042610.