Basic Information
Locus ID:
gene:TRIDC1AG040890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 471607849 | 471613884 | + | gene:TRIDC1AG040890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 103,749.98 Da | 51.94 | 72.69 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 7 | 262 | 6.17617E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 8 | 262 | 3.2E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 309 | 3.91E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 336 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 87 | 4.8E-23 | - |
| SMART | SM00220 | serkin_6 | 8 | 262 | 2.2E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 8 | 262 | 46.293808 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 14 | 37 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 523 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44200.1 | NIMA (never in mitosis, gene A)-related 6. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. | 0 |
| RefSeq | XP_037417620.1 | serine/threonine-protein kinase Nek4-like [Triticum dicoccoides] | 0 |
| Q60DG4 | Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7P5M5 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG040890.