Basic Information
Locus ID:
gene:TRIDC1AG040810
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 470921254 | 470923005 | + | gene:TRIDC1AG040810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 46,969.33 Da | 53.93 | 100.57 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 35 | 76 | 9.29753E-23 | - |
| Pfam | PF04564 | U-box domain | 32 | 95 | 1.1E-17 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 30 | 96 | 2.0E-24 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 25 | 99 | 1.6E-24 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 34 | 97 | 4.9E-26 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 30 | 104 | 32.934307 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18710.1 | plant U-box 29. Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. | 0 |
| RefSeq | XP_037417595.1 | U-box domain-containing protein 29-like [Triticum dicoccoides] | 0 |
| Q9LSA6 | U-box domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=PUB29 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y258 | U-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG040810.