Basic Information
Locus ID:
gene:TRIDC1AG040680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 468934494 | 468938223 | - | gene:TRIDC1AG040680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 50,663.46 Da | 64.01 | 73.19 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 58 | 111 | 3.2E-8 | IPR001810 |
| Pfam | PF01167 | Tub family | 122 | 452 | 9.0E-118 | IPR000007 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 108 | 457 | 1.57E-102 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 103 | 1.09E-6 | IPR036047 |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 118 | 451 | 1.0E-98 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 54 | 106 | 4.0E-6 | - |
| ProSitePatterns | PS01200 | Tub family signature 1. | 368 | 381 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 241 | 268 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 368 | 384 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 435 | 457 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 414 | 433 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 191 | 215 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 175 | 191 | 2.3E-78 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 350 | 367 | 2.3E-78 | IPR000007 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 410 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25280.1 | tubby like protein 10. Member of TLP family | 0 |
| RefSeq | XP_037417514.1 | tubby-like F-box protein 8 [Triticum dicoccoides] | 0 |
| Q75HX5 | Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7K1J4 | Tubby-like F-box protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG040680.