Basic Information
Locus ID:
gene:TRIDC1AG040320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
SnRK2.4
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 467302873 | 467306564 | - | gene:TRIDC1AG040320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 42,111.36 Da | 45.94 | 86.68 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 14 | 270 | 9.8E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 311 | 2.29E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 89 | 1.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 277 | 8.9E-64 | - |
| SMART | SM00220 | serkin_6 | 14 | 270 | 6.0E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 270 | 48.654186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 351 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63650.1 | SNF1-related protein kinase 2.5. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. | 0 |
| RefSeq | XP_037417406.1 | serine/threonine-protein kinase SAPK4-like [Triticum dicoccoides] | 0 |
| Q5N942 | Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK4 PE=2 SV=2 | 0 | |
| TrEMBL | M8B527 | Serine/threonine-protein kinase SAPK4 OS=Triticum urartu OX=4572 GN=TRIUR3_02214 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG040320.