Basic Information
Locus ID:
gene:TRIDC1AG037940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Breast carcinoma amplified sequence 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 448044875 | 448051079 | - | gene:TRIDC1AG037940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 111,323.86 Da | 48.80 | 76.07 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12490 | Breast carcinoma amplified sequence 3 | 527 | 772 | 2.0E-85 | IPR022175 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 90 | 484 | 2.62E-16 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 71 | 502 | 2.4E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 380 | 420 | 1.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 441 | 481 | 83.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1020 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54710.1 | homolog of yeast autophagy 18 (ATG18) H. | 0 |
| RefSeq | XP_037416122.1 | autophagy-related protein 18h-like [Triticum dicoccoides] | 0 |
| Q8H1Q5 | Autophagy-related protein 18h OS=Arabidopsis thaliana OX=3702 GN=ATG18H PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Y1G8 | BCAS3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG037940.