Basic Information
Locus ID:
gene:TRIDC1AG036660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 433035855 | 433039900 | + | gene:TRIDC1AG036660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 52,752.70 Da | 59.81 | 66.37 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 427 | 470 | 1.34837E-19 | - |
| Pfam | PF13639 | Ring finger domain | 427 | 470 | 1.8E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 418 | 475 | 1.87E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 390 | 475 | 1.9E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 428 | 469 | 6.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 428 | 470 | 12.725326 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 209 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45290.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037415141.1 | E3 ubiquitin-protein ligase RLIM-like [Triticum dicoccoides] | 0 |
| Q6GPV5 | E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Y1J7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG036660.