Basic Information
Locus ID:
gene:TRIDC1AG035720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic homologs of the JAB domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 421869013 | 421871923 | - | gene:TRIDC1AG035720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 35,302.27 Da | 40.95 | 91.23 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08069 | MPN_RPN11_CSN5 | 28 | 293 | 9.54885E-156 | - |
| Pfam | PF13012 | Maintenance of mitochondrial structure and function | 180 | 302 | 2.0E-14 | IPR024969 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 34 | 145 | 2.5E-32 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 38 | 175 | 4.58E-19 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 16 | 241 | 1.9E-80 | - |
| SMART | SM00232 | pad1_6 | 37 | 172 | 3.4E-48 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 38 | 173 | 35.812176 | IPR037518 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23540.1 | Mov34/MPN/PAD-1 family protein. | 0 |
| RefSeq | XP_037414464.1 | 26S proteasome non-ATPase regulatory subunit 14 homolog [Triticum dicoccoides] | 0 |
| Q9LT08 | 26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y160 | MPN domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG035720.