Basic Information
Locus ID:
gene:TRIDC1AG034190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBI3
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-48-linked is involved in protein degradation via the proteasome
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 399583285 | 399584267 | + | gene:TRIDC1AG034190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.94 | 16,334.53 Da | 56.47 | 79.93 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 113 | 145 | 9.1E-10 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 104 | 145 | 2.76E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 110 | 145 | 1.9E-18 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 111 | 145 | 11.376856 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 121 | 141 | 4.1E-10 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 142 | 145 | 4.1E-10 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_037430370.1 | ubiquitin-60S ribosomal protein L40-like [Triticum dicoccoides] | 0 |
| P69310 | Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y0J3 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG034190.