Basic Information
Locus ID:
gene:TRIDC1AG032880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Armadillo/beta-catenin-like repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 387739477 | 387751608 | + | gene:TRIDC1AG032880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 99,061.46 Da | 40.81 | 98.24 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 442 | 476 | 2.2E-4 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 611 | 648 | 1.8E-8 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 564 | 604 | 3.0E-6 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 520 | 562 | 4.4E-6 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 697 | 733 | 1.5E-7 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 650 | 692 | 7.8E-7 | IPR000225 |
| Pfam | PF12937 | F-box-like | 59 | 103 | 2.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 97 | 4.25E-5 | IPR036047 |
| SUPERFAMILY | SSF48371 | ARM repeat | 378 | 764 | 1.44E-48 | IPR016024 |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 311 | 1.18E-18 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 591 | 793 | 2.2E-43 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 377 | 480 | 2.3E-9 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 481 | 590 | 2.6E-22 | IPR011989 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 51 | 324 | 5.0E-36 | IPR032675 |
| SMART | SM00256 | fbox_2 | 60 | 100 | 1.1E-4 | IPR001810 |
| SMART | SM00185 | arm_5 | 650 | 693 | 0.0035 | IPR000225 |
| SMART | SM00185 | arm_5 | 437 | 477 | 5.5 | IPR000225 |
| SMART | SM00185 | arm_5 | 735 | 776 | 6.8 | IPR000225 |
| SMART | SM00185 | arm_5 | 609 | 649 | 3.4E-6 | IPR000225 |
| SMART | SM00185 | arm_5 | 519 | 562 | 2.0E-4 | IPR000225 |
| SMART | SM00185 | arm_5 | 478 | 518 | 0.18 | IPR000225 |
| SMART | SM00185 | arm_5 | 694 | 734 | 0.0013 | IPR000225 |
| SMART | SM00185 | arm_5 | 563 | 604 | 0.079 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 574 | 609 | 9.5724 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 620 | 662 | 15.1024 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 448 | 490 | 8.837399 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 530 | 575 | 11.6724 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 489 | 531 | 10.7974 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 661 | 706 | 11.3924 | IPR000225 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 705 | 747 | 13.212399 | IPR000225 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44900.1 | ARABIDILLO-1. ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings. | 0 |
| RefSeq | XP_037412530.1 | protein ARABIDILLO 1-like [Triticum dicoccoides] | 0 |
| O22161 | Protein ARABIDILLO 1 OS=Arabidopsis thaliana OX=3702 GN=FBX5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7P0A6 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG032880.