Basic Information
Locus ID:
gene:TRIDC1AG032540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 382500394 | 382501899 | + | gene:TRIDC1AG032540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 34,317.61 Da | 60.32 | 74.69 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 268 | 316 | 1.5E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 259 | 324 | 6.1E-10 | IPR013083 |
| PIRSF | PIRSF036836 | SBP1_RNase_bind | 13 | 324 | 8.5E-75 | IPR017066 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 270 | 312 | 9.494419 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| Coils | Coil | Coil | 184 | 204 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17680.1 | SBP (S-ribonuclease binding protein) family protein. | 0 |
| RefSeq | XP_037412249.1 | BOI-related E3 ubiquitin-protein ligase 1-like [Triticum dicoccoides] | 0 |
| Q9LDD1 | Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7K237 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG032540.