Basic Information
Locus ID:
gene:TRIDC1AG032510
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 381894362 | 381895507 | - | gene:TRIDC1AG032510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 38,604.33 Da | 82.44 | 82.65 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 142 | 185 | 6.6659E-19 | - |
| Pfam | PF13639 | Ring finger domain | 142 | 185 | 6.9E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 139 | 193 | 1.18E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 190 | 1.1E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 143 | 184 | 1.7E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 143 | 185 | 11.382803 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57750.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037412238.1 | E3 ubiquitin-protein ligase ATL4-like [Triticum dicoccoides] | 0 |
| Q9FHG8 | Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Y191 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG032510.