Basic Information
Locus ID:
gene:TRIDC1AG031400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 371687741 | 371691454 | + | gene:TRIDC1AG031400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 87,806.10 Da | 58.13 | 83.10 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 47 | 209 | 6.59279E-31 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 719 | 760 | 5.83298E-23 | - |
| Pfam | PF04564 | U-box domain | 716 | 787 | 5.7E-18 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 456 | 680 | 1.4E-27 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 78 | 171 | 3.52E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 688 | 4.92E-50 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 713 | 789 | 3.62E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 512 | 702 | 5.8E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 511 | 5.1E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 714 | 790 | 6.4E-27 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 42 | 172 | 2.6E-7 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 718 | 781 | 5.7E-27 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 714 | 788 | 32.014355 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 694 | 23.976223 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 320 | - | - |
| Coils | Coil | Coil | 357 | 405 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_044407841.1 | U-box domain-containing protein 33-like [Triticum aestivum] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5Y0D4 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG031400.