HalophFGD

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Basic Information
Locus ID: gene:TRIDC1AG030860
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: WD domain, G-beta repeat
Maps and Mapping Data
Chromosome Start End Strand ID
1A 367909738 367912606 + gene:TRIDC1AG030860
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.62 13,686.35 Da 25.22 70.57 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 46 103 4.82E-11 IPR036322
Gene3D G3DSA:2.130.10.10 - 45 123 4.9E-12 IPR015943
SMART SM00320 WD40_4 48 87 1.5E-5 IPR001680
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile. 55 87 11.049229 -
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile. 55 96 13.750016 IPR001680
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K11804 (DDB1- and CUL4-associated factor 8)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G35140.1 Transducin/WD40 repeat-like superfamily protein. 0
RefSeq XP_037411154.1 DDB1- and CUL4-associated factor 8-like [Triticum dicoccoides] 0
Swiss-Prot Q8N7N5 DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 0
TrEMBL A0A3B5XZS3 DDB1-and CUL4-associated factor 8 OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC1AG030860.

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