Basic Information
Locus ID:
gene:TRIDC1AG030070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CDKE-1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 357441699 | 357446892 | - | gene:TRIDC1AG030070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 52,363.55 Da | 34.98 | 81.15 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07842 | STKc_CDK8_like | 17 | 333 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 18 | 333 | 3.8E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 335 | 1.62E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 347 | 2.9E-70 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 105 | 5.6E-24 | - |
| SMART | SM00220 | serkin_6 | 18 | 333 | 7.5E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 333 | 46.845036 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 56 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 389 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63610.1 | cyclin-dependent kinase E;1. significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. | 0 |
| RefSeq | XP_037410716.1 | cyclin-dependent kinase E-1 [Triticum dicoccoides] | 0 |
| Q336M2 | Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKE-1 PE=2 SV=2 | 0 | |
| TrEMBL | W4ZQI0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG030070.