Basic Information
Locus ID:
gene:TRIDC1AG029240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 350493523 | 350495523 | + | gene:TRIDC1AG029240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 45,347.70 Da | 44.23 | 66.57 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 33 | 145 | 6.7E-29 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 3 | 147 | 8.44E-43 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 152 | 7.7E-46 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 148 | 29.073805 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 91 | 108 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 203 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46740.2 | - | 0 |
| RefSeq | XP_044432682.1 | ubiquitin carboxyl-terminal hydrolase 36-like [Triticum aestivum] | 0 |
| Q9FIQ1 | Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana OX=3702 GN=UBP21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7P228 | USP domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG029240.