Basic Information
Locus ID:
gene:TRIDC1AG025790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 303463491 | 303466064 | - | gene:TRIDC1AG025790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 23,994.41 Da | 62.75 | 84.17 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14447 | Prokaryotic RING finger family 4 | 110 | 156 | 1.6E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 98 | 153 | 1.63E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 157 | 1.3E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 110 | 147 | 2.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 110 | 148 | 11.95817 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 125 | 134 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47160.3 | - | 0 |
| RefSeq | XP_037408394.1 | E3 ubiquitin-protein ligase AIRP2-like [Triticum dicoccoides] | 0 |
| Q9M022 | E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452YK27 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG025790.