Basic Information
Locus ID:
gene:TRIDC1AG024720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 293102127 | 293107265 | - | gene:TRIDC1AG024720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.42 | 38,132.54 Da | 60.05 | 64.00 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 229 | 271 | 2.0624E-26 | - |
| Pfam | PF13639 | Ring finger domain | 229 | 271 | 9.1E-12 | IPR001841 |
| Pfam | PF14369 | zinc-ribbon | 16 | 50 | 7.5E-11 | IPR039525 |
| SUPERFAMILY | SSF57850 | RING/U-box | 224 | 278 | 1.67E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 277 | 4.1E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 230 | 270 | 5.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 230 | 271 | 12.1057 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 370 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19950.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037407596.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| P0CH30 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452YHS9 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG024720.