Basic Information
Locus ID:
gene:TRIDC1AG023060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 264005971 | 264012509 | + | gene:TRIDC1AG023060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 69,451.98 Da | 42.89 | 85.17 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 459 | 508 | 2.0E-4 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 308 | 341 | 8.1E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 589 | 621 | 0.0052 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 302 | 621 | 7.85E-44 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 210 | 430 | 8.7E-18 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 583 | 625 | 1.8E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 431 | 582 | 2.7E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 585 | 623 | 7.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 491 | 530 | 0.86 | IPR001680 |
| SMART | SM00320 | WD40_4 | 447 | 488 | 1.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 342 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 348 | 387 | 46.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 310 | 351 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 498 | 531 | 8.937796 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 310 | 345 | 11.602863 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 591 | 625 | 10.100143 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 591 | 625 | 10.441614 | IPR001680 |
| Coils | Coil | Coil | 179 | 220 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037406302.1 | WD repeat-containing protein 91 homolog [Triticum dicoccoides] | 0 |
| Q55FJ2 | WD repeat-containing protein 91 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr91 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8R7NZ64 | ANAPC4_WD40 domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG023060.