Basic Information
Locus ID:
gene:TRIDC1AG022780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 260308546 | 260312936 | + | gene:TRIDC1AG022780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 118,024.81 Da | 32.16 | 99.60 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 795 | 1060 | 1.82643E-83 | - |
| Pfam | PF13855 | Leucine rich repeat | 618 | 674 | 5.8E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 302 | 324 | 0.18 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 144 | 7.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 794 | 1058 | 5.9E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 566 | 588 | 1.7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 494 | 553 | 1.3E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 769 | 1058 | 1.22E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 366 | 680 | 7.46E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 316 | 1.16E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 251 | 363 | 5.7E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 53 | 3.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 870 | 1074 | 3.7E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 752 | 869 | 3.8E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 364 | 466 | 1.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 467 | 580 | 1.9E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 146 | 4.7E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 250 | 3.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 581 | 708 | 3.2E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 612 | 636 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 516 | 539 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 179 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 637 | 660 | 8.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 540 | 564 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 323 | 5.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 324 | 348 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 131 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 226 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 227 | 251 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 661 | 686 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 10 | 34 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 372 | 396 | 50.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 789 | 1068 | 39.43882 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 915 | 927 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 795 | 817 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 637 | 650 | 9.6E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 303 | 316 | 9.6E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037406101.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5XXU6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG022780.