Basic Information
Locus ID:
gene:TRIDC1AG022750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 259874795 | 259878122 | + | gene:TRIDC1AG022750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 114,952.61 Da | 35.20 | 102.39 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 128 | 187 | 3.3E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 772 | 1044 | 4.1E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 73 | 1.5E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 287 | 668 | 3.17E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 751 | 1048 | 5.88E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 382 | 6.29E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 271 | 2.3E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 853 | 1060 | 6.4E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 442 | 682 | 5.7E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 733 | 851 | 4.9E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 194 | 7.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 274 | 441 | 6.1E-49 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 632 | 655 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 415 | 439 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 366 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 390 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 222 | 246 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 173 | 45.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 771 | 1061 | 36.612019 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 900 | 912 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 777 | 800 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037406081.1 | MDIS1-interacting receptor like kinase 2-like [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B5XY52 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG022750.