Basic Information
Locus ID:
gene:TRIDC1AG021430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine-rich repeats, typical (most populated) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 246543634 | 246548773 | - | gene:TRIDC1AG021430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 40,379.90 Da | 39.62 | 105.09 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 271 | 325 | 1.4E-6 | IPR001611 |
| Pfam | PF00240 | Ubiquitin family | 8 | 79 | 2.3E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 78 | 4.84E-17 | IPR029071 |
| SUPERFAMILY | SSF52058 | L domain-like | 129 | 328 | 3.26E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 101 | 343 | 3.8E-44 | IPR032675 |
| Gene3D | G3DSA:3.10.20.90 | - | 3 | 81 | 2.4E-20 | - |
| SMART | SM00364 | LRR_bac_2 | 220 | 239 | 110.0 | - |
| SMART | SM00364 | LRR_bac_2 | 243 | 262 | 0.97 | - |
| SMART | SM00364 | LRR_bac_2 | 197 | 216 | 46.0 | - |
| SMART | SM00364 | LRR_bac_2 | 289 | 308 | 50.0 | - |
| SMART | SM00369 | LRR_typ_2 | 267 | 288 | 270.0 | IPR003591 |
| SMART | SM00213 | ubq_7 | 8 | 78 | 3.1E-11 | IPR000626 |
| SMART | SM00369 | LRR_typ_2 | 197 | 218 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 0.0065 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 0.13 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 242 | 47.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 291 | 312 | 7.249913 | IPR001611 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 79 | 14.447187 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30105.1 | 0 | |
| RefSeq | XP_037405238.1 | plant intracellular Ras-group-related LRR protein 8-like [Triticum dicoccoides] | 0 |
| Q7XDQ7 | Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5XXW5 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG021430.