Basic Information
Locus ID:
gene:TRIDC1AG020490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 225207026 | 225232610 | + | gene:TRIDC1AG020490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 105,448.86 Da | 47.42 | 82.54 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 752 | 907 | 4.40487E-59 | - |
| Pfam | PF06337 | DUSP domain | 41 | 138 | 8.5E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 314 | 906 | 1.1E-84 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 138 | 1.02E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 312 | 909 | 1.69E-112 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 713 | 916 | 1.3E-56 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 13 | 150 | 5.8E-32 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 238 | 1.9E-13 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 512 | 4.2E-68 | - |
| SMART | SM00695 | dusp | 37 | 140 | 3.8E-21 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 314 | 909 | 58.943481 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 18.96891 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 315 | 330 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 851 | 868 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_037404662.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Triticum dicoccoides] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5XXD8 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG020490.