Basic Information
Locus ID:
gene:TRIDC1AG014830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 112200677 | 112204022 | + | gene:TRIDC1AG014830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 99,054.51 Da | 37.51 | 87.78 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 439 | 529 | 1.31634E-15 | - |
| CDD | cd14066 | STKc_IRAK | 609 | 878 | 2.0912E-87 | - |
| CDD | cd00028 | B_lectin | 128 | 253 | 5.79713E-28 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 452 | 509 | 4.7E-10 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 313 | 420 | 6.3E-29 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 174 | 279 | 9.5E-35 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 606 | 873 | 1.6E-44 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 161 | 319 | 6.02E-29 | IPR036426 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 455 | 504 | 5.89E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 585 | 875 | 4.05E-73 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 115 | 250 | 1.3E-22 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 883 | 2.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 568 | 677 | 1.3E-29 | - |
| SMART | SM00220 | serkin_6 | 603 | 879 | 3.0E-25 | IPR000719 |
| SMART | SM00473 | ntp_6 | 452 | 528 | 1.2E-5 | IPR003609 |
| SMART | SM00108 | blect_4 | 125 | 253 | 6.8E-29 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 91 | 894 | 4.5E-271 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 119 | 249 | 18.041599 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 603 | 879 | 33.926559 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 443 | 530 | 9.438666 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 609 | 631 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037487682.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum dicoccoides] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6W4W5 | Receptor-like serine/threonine-protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG014830.