HalophFGD

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Basic Information
Locus ID: gene:TRIDC1AG014430
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: WD40 repeats
Maps and Mapping Data
Chromosome Start End Strand ID
1A 107040272 107046110 - gene:TRIDC1AG014430
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.94 43,017.64 Da 41.54 76.96 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 24 268 6.05E-26 IPR036322
Gene3D G3DSA:2.130.10.10 - 24 306 6.6E-17 IPR015943
SMART SM00320 WD40_4 181 221 0.16 IPR001680
SMART SM00320 WD40_4 224 265 0.29 IPR001680
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G56440.1 homolog of yeast autophagy 18 (ATG18) D. 0
RefSeq XP_037487431.1 autophagy-related protein 18d-like [Triticum dicoccoides] 0
Swiss-Prot Q0WPK3 Autophagy-related protein 18d OS=Arabidopsis thaliana OX=3702 GN=ATG18D PE=2 SV=1 0
TrEMBL U3PWS7 Autophagy-related protein 18d OS=Triticum aestivum OX=4565 GN=ATG18d PE=2 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC1AG014430.

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