Basic Information
Locus ID:
gene:TRIDC1AG012970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 84398905 | 84399802 | - | gene:TRIDC1AG012970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 13,317.12 Da | 41.00 | 61.08 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17123 | RING-like zinc finger | 50 | 78 | 5.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 32 | 100 | 6.36E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 29 | 100 | 1.8E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 50 | 91 | 1.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 50 | 92 | 12.061441 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 120 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037405598.1 | E3 ubiquitin-protein ligase RNF181-like [Triticum dicoccoides] | 0 |
| Q5SSZ7 | E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus OX=10090 GN=Znrf3 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZHC9 | E3 ubiquitin-protein ligase RING1-like protein OS=Triticum urartu OX=4572 GN=TRIUR3_20615 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG012970.