HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC1AG009760
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Short Name: WDR3
Description: snoRNA binding
Maps and Mapping Data
Chromosome Start End Strand ID
1A 54247427 54259820 - gene:TRIDC1AG009760
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.25 11,203.51 Da 42.88 67.88 -0.44
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 2 71 9.61E-12 IPR036322
Gene3D G3DSA:2.130.10.10 - 1 92 1.7E-12 IPR015943
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K14556 (U3 small nucleolar RNA-associated protein 12)
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes) map03008 (Ribosome biogenesis in eukaryotes)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039024828.1 WD repeat-containing protein 3-like [Hibiscus syriacus] 0
TrEMBL A0A453J1F5 WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC1AG009760.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.