Basic Information
Locus ID:
gene:TRIDC1AG008920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 49247948 | 49257724 | + | gene:TRIDC1AG008920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 52,827.64 Da | 47.83 | 71.79 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 406 | 442 | 0.017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 320 | 3.0E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 358 | 401 | 0.21 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 243 | 275 | 0.028 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 108 | 443 | 7.32E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 341 | 465 | 3.0E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 79 | 340 | 2.4E-35 | IPR015943 |
| SMART | SM00320 | WD40_4 | 235 | 275 | 3.4E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 356 | 401 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 94 | 130 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 134 | 175 | 46.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 281 | 320 | 2.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 189 | 232 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 404 | 443 | 1.0E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 242 | 275 | 9.09833 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 411 | 443 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 288 | 322 | 9.915599 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 288 | 329 | 12.246197 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 242 | 275 | 10.842632 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03020.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037483806.1 | LEC14B protein-like isoform X1 [Triticum dicoccoides] | 0 |
| O24467 | LEC14B homolog OS=Prunus armeniaca OX=36596 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5XV18 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG008920.