Basic Information
Locus ID:
gene:TRIDC1AG008100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 42558815 | 42563560 | + | gene:TRIDC1AG008100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 127,559.26 Da | 40.77 | 87.40 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 751 | 1138 | 1.27062E-106 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 800 | 1140 | 1.5E-76 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 2 | 233 | 7.37E-6 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 749 | 1133 | 7.85E-89 | IPR035983 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 887 | 985 | 8.4E-40 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1026 | 1137 | 1.4E-29 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 753 | 1020 | 8.4E-40 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 244 | 1.2E-12 | IPR011989 |
| SMART | SM00119 | hect_3 | 761 | 1140 | 2.6E-91 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 775 | 1140 | 60.799561 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 753 | - | - |
| Coils | Coil | Coil | 369 | 396 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037474467.1 | E3 ubiquitin-protein ligase UPL4-like [Triticum dicoccoides] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5XUV0 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG008100.