Basic Information
Locus ID:
gene:TRIDC1AG005100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the WD repeat SEC13 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 23584318 | 23587517 | - | gene:TRIDC1AG005100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 21,459.81 Da | 30.44 | 72.70 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 144 | 195 | 0.0028 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 96 | 132 | 0.0062 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 46 | 85 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 8 | 37 | 0.0075 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 5 | 199 | 4.09E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 200 | 2.5E-67 | IPR015943 |
| SMART | SM00320 | WD40_4 | 2 | 39 | 0.82 | IPR001680 |
| SMART | SM00320 | WD40_4 | 44 | 85 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 139 | 195 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 92 | 133 | 5.2E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 182 | 200 | 8.544697 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 182 | 200 | 10.14085 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 51 | 85 | 8.755605 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 51 | 85 | 10.408196 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01340.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_044383884.1 | protein transport protein SEC13 homolog B-like [Triticum aestivum] | 0 |
| Q9SRI1 | Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YRD7 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG005100.