Basic Information
Locus ID:
gene:TRIDC1AG003350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 12881175 | 12965495 | - | gene:TRIDC1AG003350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 103,664.82 Da | 40.37 | 85.85 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 618 | 885 | 9.5582E-85 | - |
| Pfam | PF13855 | Leucine rich repeat | 434 | 494 | 4.9E-13 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 614 | 883 | 8.9E-46 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 40 | 380 | 2.6E-96 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 593 | 883 | 1.07E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 421 | 503 | 6.72E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 688 | 896 | 5.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 510 | 1.8E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 687 | 3.2E-32 | - |
| SMART | SM00369 | LRR_typ_2 | 481 | 505 | 3.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 457 | 480 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 612 | 887 | 1.4E-28 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 459 | 482 | 7.942976 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 612 | 887 | 35.410629 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 618 | 640 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 460 | 473 | 4.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 481 | 494 | 4.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51850.2 | - | 0 |
| RefSeq | XP_037481586.1 | probable LRR receptor-like protein kinase At1g51890 [Triticum dicoccoides] | 0 |
| Q9LIG2 | Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana OX=3702 GN=At3g21340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452XMU0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG003350.