Basic Information
Locus ID:
gene:TRIDC1AG003110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 12229632 | 12231716 | - | gene:TRIDC1AG003110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 39,667.79 Da | 77.41 | 59.62 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 179 | 220 | 1.3609E-23 | - |
| Pfam | PF13639 | Ring finger domain | 178 | 220 | 1.1E-9 | IPR001841 |
| Pfam | PF06547 | Protein of unknown function (DUF1117) | 245 | 354 | 8.8E-44 | IPR010543 |
| SUPERFAMILY | SSF57850 | RING/U-box | 159 | 226 | 1.48E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 226 | 1.8E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 179 | 219 | 4.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 179 | 220 | 12.179465 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 373 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39720.1 | RING-H2 finger C2A. Encodes a putative RING-H2 finger protein RHC2a. | 0 |
| RefSeq | XP_037481478.1 | E3 ubiquitin-protein ligase RDUF1-like [Triticum dicoccoides] | 0 |
| O22283 | Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5XTG3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG003110.