Basic Information
Locus ID:
gene:TRIDC1AG001820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 8197530 | 8208435 | - | gene:TRIDC1AG001820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 93,855.62 Da | 41.09 | 84.53 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 359 | 450 | 1.04556E-11 | - |
| CDD | cd00028 | B_lectin | 62 | 178 | 7.56833E-22 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 531 | 795 | 9.21392E-95 | - |
| Pfam | PF08276 | PAN-like domain | 371 | 426 | 3.1E-5 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 106 | 190 | 2.9E-18 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 528 | 790 | 2.3E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 508 | 793 | 2.16E-76 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 105 | 232 | 1.07E-23 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 599 | 808 | 2.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 488 | 598 | 9.5E-29 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 88 | 237 | 1.7E-18 | - |
| SMART | SM00220 | serkin_6 | 525 | 793 | 2.9E-38 | IPR000719 |
| SMART | SM00108 | blect_4 | 56 | 178 | 6.5E-15 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 60 | 829 | 1.4E-200 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 62 | 176 | 13.834511 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 363 | 447 | 7.236212 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 525 | 808 | 40.286861 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 531 | 552 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 644 | 656 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037430313.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7JVK0 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG001820.