Basic Information
Locus ID:
gene:TRIDC1AG000580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 3789571 | 3794301 | - | gene:TRIDC1AG000580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 128,469.06 Da | 40.85 | 110.71 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 946 | 1119 | 1.1E-33 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 776 | 832 | 2.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 123 | 159 | 4.4E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 244 | 266 | 0.47 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 325 | 663 | 2.82E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 600 | 858 | 2.72E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 927 | 1121 | 2.05E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 122 | 389 | 3.06E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1022 | 1127 | 7.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 742 | 862 | 7.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 283 | 1.3E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 637 | 741 | 2.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 428 | 7.2E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 429 | 636 | 1.1E-59 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 905 | 1021 | 1.6E-27 | - |
| SMART | SM00365 | LRR_sd22_2 | 242 | 268 | 270.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 506 | 535 | 250.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 458 | 484 | 200.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 698 | 724 | 130.0 | - |
| SMART | SM00369 | LRR_typ_2 | 218 | 241 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 410 | 434 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 674 | 698 | 2.8 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 650 | 679 | 88.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 218 | 241 | 800.0 | - |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 529 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 362 | 386 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 722 | 746 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 795 | 818 | 47.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 944 | 1167 | 29.898369 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 1067 | 1079 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 950 | 973 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 242 | 255 | 8.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 221 | 234 | 8.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.2 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037480467.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8R7VFK4 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG000580.