Basic Information
Locus ID:
gene:TRIDC1AG000520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1A | 3453525 | 3457310 | - | gene:TRIDC1AG000520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 113,736.16 Da | 35.29 | 111.90 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 547 | 607 | 8.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 610 | 655 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 697 | 752 | 1.3E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 79 | 2.1E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 865 | 1036 | 7.0E-32 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 240 | 583 | 1.61E-67 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 335 | 1.79E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 850 | 1037 | 6.42E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 543 | 778 | 5.95E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 301 | 395 | 3.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 202 | 1.8E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 828 | 941 | 1.1E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 496 | 788 | 4.5E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 396 | 495 | 2.8E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 942 | 1038 | 4.4E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 300 | 4.8E-32 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 330 | 354 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 690 | 714 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 378 | 402 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 739 | 768 | 220.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 570 | 599 | 81.0 | - |
| SMART | SM00369 | LRR_typ_2 | 138 | 162 | 81.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 378 | 404 | 43.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 210 | 239 | 550.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 618 | 647 | 28.0 | - |
| SMART | SM00369 | LRR_typ_2 | 715 | 738 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 594 | 618 | 2.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 306 | 329 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 210 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 257 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 282 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 642 | 666 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 449 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 474 | 498 | 150.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 864 | 1038 | 30.209318 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 870 | 893 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 987 | 999 | - | IPR008266 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 621 | 634 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 642 | 655 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037429982.1 | MDIS1-interacting receptor like kinase 2-like [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A452XIV5 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1AG000520.