Basic Information
Locus ID:
gene:ENSEOMG00000052601
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
ABC transporter C family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 9 | 63632259 | 63637970 | + | gene:ENSEOMG00000052601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 112,140.33 Da | 38.89 | 103.76 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 764 | 984 | 3.51295E-121 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 447 | 741 | 3.88832E-98 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 146 | 346 | 2.90243E-113 | - |
| Pfam | PF00005 | ABC transporter | 783 | 931 | 6.7E-32 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 1 | 99 | 7.8E-7 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 164 | 298 | 5.7E-21 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 449 | 690 | 2.8E-31 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 2 | 131 | 2.88E-9 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 368 | 1.04E-56 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 447 | 747 | 7.85E-55 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 759 | 995 | 2.0E-65 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 412 | 747 | 5.4E-63 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 749 | 1002 | 2.8E-79 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 130 | 379 | 3.0E-74 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1 | 129 | 1.4E-19 | IPR036640 |
| SMART | SM00382 | AAA_5 | 792 | 984 | 2.1E-13 | IPR003593 |
| SMART | SM00382 | AAA_5 | 173 | 346 | 5.1E-13 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 148 | 369 | 22.62249 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 449 | 729 | 37.55265 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 1 | 112 | 14.589442 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 766 | 1000 | 18.89435 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 271 | 285 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_021736749.1 | ABC transporter C family member 3-like [Chenopodium quinoa] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LN56 | ABC-type xenobiotic transporter OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology