Basic Information
Locus ID:
gene:ENSEOMG00000052547
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 9 | 181435 | 184079 | - | gene:ENSEOMG00000052547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 29,775.63 Da | 50.32 | 87.13 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 55 | 92 | 0.02 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 14 | 51 | 0.0082 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 183 | 220 | 0.035 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 225 | 263 | 5.6E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 263 | 1.8E-51 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 227 | 265 | 3.7E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 226 | 2.7E-43 | IPR015943 |
| SMART | SM00320 | WD40_4 | 137 | 175 | 33.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 95 | 135 | 280.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 12 | 51 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 179 | 221 | 0.31 | IPR001680 |
| SMART | SM00320 | WD40_4 | 224 | 264 | 1.4E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 54 | 93 | 0.065 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 19 | 60 | 14.05078 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 231 | 265 | 11.761044 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 19 | 56 | 10.732868 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 231 | 265 | 12.546961 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 207 | 230 | 8.67045 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G08560.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_021735170.1 | uncharacterized WD repeat-containing protein C343.04c-like [Chenopodium quinoa] | 0 |
| Q9FNN2 | WD repeat-containing protein 26 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR26 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LS31 | WD repeat-containing protein 26 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology