Basic Information
Locus ID:
gene:ENSEOMG00000052277
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 9 | 54436166 | 54440773 | - | gene:ENSEOMG00000052277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 65,759.93 Da | 58.37 | 70.39 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 531 | 569 | 3.01557E-15 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 529 | 575 | 1.7E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 515 | 576 | 3.21E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 516 | 582 | 2.2E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 531 | 570 | 10.010774 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 314 | - | - |
| Coils | Coil | Coil | 147 | 167 | - | - |
| Coils | Coil | Coil | 459 | 486 | - | - |
| Coils | Coil | Coil | 87 | 107 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021729856.1 | uncharacterized protein LOC110696831 [Chenopodium quinoa] | 0 |
| Q0MW30 | E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus OX=10090 GN=Neurl1b PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N6H5 | RING-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology