Basic Information
Locus ID:
gene:ENSEOMG00000051407
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
Very-long-chain enoyl-CoA
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 8 | 73178636 | 73182331 | + | gene:ENSEOMG00000051407 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.70 | 36,190.63 Da | 44.67 | 84.84 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01801 | Ubl_TECR_like | 2 | 86 | 3.09614E-21 | - |
| Pfam | PF02544 | 3-oxo-5-alpha-steroid 4-dehydrogenase | 159 | 309 | 5.1E-28 | IPR001104 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 89 | 4.44E-6 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 86 | 3.6E-7 | - |
| ProSiteProfiles | PS50244 | Steroid 5-alpha reductase C-terminal domain profile. | 199 | 280 | 22.785671 | IPR001104 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 88 | 8.763808 | IPR000626 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00062 (Fatty acid elongation)
map00062 (Fatty acid elongation)
ko01040 (Biosynthesis of unsaturated fatty acids)
map01040 (Biosynthesis of unsaturated fatty acids)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01212 (Fatty acid metabolism)
map01212 (Fatty acid metabolism)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55360.1 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein. Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport. | 0 |
| RefSeq | XP_021760082.1 | very-long-chain enoyl-CoA reductase-like [Chenopodium quinoa] | 0 |
| Q9M2U2 | Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana OX=3702 GN=ECR PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LKT1 | S5A_REDUCTASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9918 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16572 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah035410 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g024650 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg21182, Sbi_jg21183, Sbi_jg22622 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16510 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016300 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62596, Sgl67142 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000019896, gene:ENSEOMG00000021554 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0018220, CQ.Regalona.r1.2AG0020030 |
| Apiaceae | Apium graveolens | 1 | Ag10G01144 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G015260, COCNU_12G007740 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103696797, gene-LOC103703465 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3483.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri6G08988 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G55360.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010564m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g07110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g069740.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1112 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno15g07420, gene.Cymno18g00290 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0084s00018.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate06g00880, gene.Thate08g12850 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1623 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00040112 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb7G33696, Lb7G33783 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.665, BH02.671, CH02.767 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0009730, gene-QOZ80_1BG0058340 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0230880.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_018646 |
| Poaceae | Oryza coarctata | 2 | Oco01G001940, Oco02G001940 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g05670.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G064200, gene-BS78_03G064600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G023480, Chr03G004330, Chr08G000810 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G136400 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2BG064920, gene_TRIDC3AG008900 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G074900.1, TraesCS3D02G074700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb335900_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-13028, nbis-gene-6949 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g7605, Zma_g9969 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG05.867 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g15020 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.400, evm.TU.Scaffold_4_RagTag.1725 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14025, nbisL1-mrna-26012 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2571, nbisL1-mrna-7654 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-14181, nbisL1-mrna-4530 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000005l.113, evm.TU.utg000008l.960 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001518, Maker00010059 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-17543, nbisL1-mrna-2093, nbisL1-mrna-493 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19536, nbisL1-mrna-9460 |
| Salicaceae | Populus euphratica | 2 | populus_peu06427, populus_peu20268 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132640202 |
| Solanaceae | Solanum chilense | 1 | SOLCI001058000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020319 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.14934_chr08_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G1770, TC08G0755 |
| Zosteraceae | Zostera marina | 2 | Zosma06g14880.v3.1, Zosma1315g00010.v3.1 |