HalophFGD

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Basic Information
Locus ID: gene:ENSEOMG00000051061
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
9 13433857 13437218 - gene:ENSEOMG00000051061
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.01 26,477.64 Da 53.31 86.69 -0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF01693 Caulimovirus viroplasmin 114 152 1.0E-14 IPR011320
SUPERFAMILY SSF55658 L9 N-domain-like 112 155 1.78E-12 IPR009027
Gene3D G3DSA:3.40.970.10 - 112 157 2.3E-15 IPR037056
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021836735.1 uncharacterized protein LOC110776486 [Spinacia oleracea] 0
Swiss-Prot Q9KEI9 Ribonuclease H OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rnhA PE=1 SV=1 0
TrEMBL A0A0M0KBW8 Ribonuclease H OS=Halalkalibacterium halodurans OX=86665 GN=AMD02_003755 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 2 Ah010879, Ah010883
Amaranthaceae Salicornia bigelovii 2 Sbi_jg60894, Sbi_jg60899
Amaranthaceae Salicornia europaea 9 Seu_jg17617, Seu_jg22467, Seu_jg22477, Seu_jg22478 ...
Seu_jg22481, Seu_jg22488, Seu_jg22493, Seu_jg22718, Seu_jg4086
Amaranthaceae Suaeda aralocaspica 1 GOSA_00019041
Amaranthaceae Suaeda glauca 2 Sgl15092, Sgl20220
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000051061
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.