Basic Information
Locus ID:
gene:ENSEOMG00000050188
Species & Taxonomic ID:
Chenopodium album & 3559
Genome Assembly:
GCA_948465745.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 9 | 2250491 | 2255779 | + | gene:ENSEOMG00000050188 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 49,214.27 Da | 59.24 | 91.08 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 201 | 249 | 1.2775E-13 | - |
| Pfam | PF12906 | RING-variant domain | 201 | 248 | 8.9E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 197 | 252 | 1.67E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 188 | 256 | 5.9E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 200 | 249 | 3.0E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 193 | 255 | 18.187756 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 424 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021724637.1 | uncharacterized protein LOC110691961 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9QGW0 | RING-CH-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_180040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology