HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:ENSEOMG00000050145
Species & Taxonomic ID: Chenopodium album & 3559
Genome Assembly: GCA_948465745.1
Description: hydroxyproline O-arabinosyltransferase activity
Maps and Mapping Data
Chromosome Start End Strand ID
8 76794595 76799573 - gene:ENSEOMG00000050145
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.54 31,586.02 Da 45.23 76.50 -0.40
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K20782 (hydroxyproline O-arabinosyltransferase [EC:2.4.2.58])
Pathway:
ko00514 (Other types of O-glycan biosynthesis) map00514 (Other types of O-glycan biosynthesis)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G25265.1 0
RefSeq XP_021769403.1 hydroxyproline O-arabinosyltransferase 1-like [Chenopodium quinoa] 0
Swiss-Prot Q8W4E6 Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT1 PE=1 SV=1 0
TrEMBL A0A0K9S141 Hydroxyproline O-arabinosyltransferase 1-like OS=Spinacia oleracea OX=3562 GN=SOVF_012000 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg1537, jg29894, jg35605, jg36566, jg4630, jg8523
Aizoaceae Mesembryanthemum crystallinum 4 gene_17153, gene_17905, gene_9966, gene_9967
Amaranthaceae Atriplex hortensis 5 Ah005072, Ah005073, Ah032343, Ah034803, Ah038287
Amaranthaceae Beta vulgaris 4 BVRB_2g030960, BVRB_2g041690, BVRB_4g073690, BVRB_4g073700
Amaranthaceae Salicornia bigelovii 6 Sbi_jg17784, Sbi_jg21109, Sbi_jg22695, Sbi_jg30012 ...
Sbi_jg43450, Sbi_jg62444
Amaranthaceae Salicornia europaea 3 Seu_jg1018, Seu_jg16571, Seu_jg18450
Amaranthaceae Suaeda aralocaspica 3 GOSA_00004219, GOSA_00007208, GOSA_00018306
Amaranthaceae Suaeda glauca 6 Sgl59148, Sgl59149, Sgl62374, Sgl66233, Sgl66911, Sgl70551
Amaranthaceae Chenopodium album 8 gene:ENSEOMG00000013319, gene:ENSEOMG00000017584 ...
gene:ENSEOMG00000020257, gene:ENSEOMG00000020355, gene:ENSEOMG00000029773, gene:ENSEOMG00000042139, gene:ENSEOMG00000050145, gene:ENSEOMG00000051874
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.1BG0021720, CQ.Regalona.r1.2AG0004190 ...
CQ.Regalona.r1.2AG0023450, CQ.Regalona.r1.2BG0005470, CQ.Regalona.r1.4AG0002210
Anacardiaceae Pistacia vera 3 pistato.v30038820, pistato.v30050700, pistato.v30250560
Apiaceae Apium graveolens 4 Ag11G04405, Ag7G01349, Ag7G01705, Ag9G01468
Arecaceae Cocos nucifera 4 COCNU_02G017910, COCNU_04G006760, COCNU_12G004520 ...
COCNU_16G002030
Arecaceae Phoenix dactylifera 4 gene-LOC103701651, gene-LOC103705083, gene-LOC103716922 ...
gene-LOC103719210
Asparagaceae Asparagus officinalis 3 AsparagusV1_03.2504.V1.1, AsparagusV1_07.1688.V1.1 ...
AsparagusV1_08.815.V1.1
Asteraceae Flaveria trinervia 3 Ftri15G31300, Ftri16G19837, Ftri18G14732
Brassicaceae Arabidopsis thaliana 3 AT2G25260.1, AT5G13500.1, AT5G25265.1
Brassicaceae Eutrema salsugineum 3 Thhalv10000212m.g.v1.0, Thhalv10004426m.g.v1.0 ...
Thhalv10013935m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp2g22280.v2.2, Sp4g04380.v2.2, Sp6g30520.v2.2
Brassicaceae Brassica nigra 6 BniB01g018020.2N, BniB02g049040.2N, BniB04g003850.2N ...
BniB05g024840.2N, BniB07g039850.2N, BniB08g006360.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq04G2400, Ceq04G2402, Ceq05G0896, Ceq05G1620
Casuarinaceae Casuarina glauca 5 Cgl04G2601, Cgl04G2606, Cgl04G2607, Cgl05G0908, Cgl05G1615
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno02g05430, gene.Cymno05g01840, gene.Cymno06g08030 ...
gene.Cymno08g05450
Dunaliellaceae Dunaliella salina 1 Dusal.0438s00001.v1.0
Hydrocharitaceae Thalassia testudinum 4 gene.Thate01g12710, gene.Thate01g26000, gene.Thate02g08060 ...
gene.Thate07g07870
Nitrariaceae Nitraria sibirica 3 evm.TU.LG02.2004, evm.TU.LG07.1492, evm.TU.LG09.131
Plantaginaceae Plantago ovata 3 Pov_00004805, Pov_00024396, Pov_00039380
Plumbaginaceae Limonium bicolor 6 Lb0G36730, Lb1G02367, Lb2G12888, Lb2G12946, Lb7G35164 ...
Lb7G35168
Poaceae Echinochloa crus-galli 12 AH05.2640, AH06.534, AH07.3301, BH05.1185, BH05.2727 ...
BH06.578, BH07.3119, CH01.2671, CH01.4786, CH05.1525, CH06.593, CH07.3189
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_1AG0004110, gene-QOZ80_1BG0052530 ...
gene-QOZ80_5AG0374990, gene-QOZ80_5BG0421250, gene-QOZ80_6AG0511060, gene-QOZ80_6BG0463130
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.1HG0058910.1, HORVU.MOREX.r3.3HG0256430.1 ...
HORVU.MOREX.r3.5HG0497880.1, HORVU.MOREX.r3.7HG0658270.1
Poaceae Lolium multiflorum 5 gene-QYE76_018368, gene-QYE76_027711, gene-QYE76_028226 ...
gene-QYE76_028268, gene-QYE76_052374
Poaceae Oryza coarctata 6 Oco01G007650, Oco02G007970, Oco09G008470, Oco10G008630 ...
Oco11G003670, Oco12G003660
Poaceae Oryza sativa 3 LOC_Os01g16600.1, LOC_Os05g32060.1, LOC_Os06g08180.1
Poaceae Paspalum vaginatum 3 gene-BS78_03G116500, gene-BS78_09G129000 ...
gene-BS78_10G063300
Poaceae Puccinellia tenuiflora 4 Pt_Chr0207119, Pt_Chr0505473, Pt_Chr0603774, Pt_Chr0603856
Poaceae Sporobolus alterniflorus 7 Chr02G026970, Chr03G001270, Chr05G004680, Chr08G003870 ...
Chr11G021610, Chr18G007930, Chr22G009630
Poaceae Thinopyrum elongatum 3 Tel1E01G400100, Tel3E01G322100, Tel7E01G293300
Poaceae Triticum dicoccoides 6 gene_TRIDC1AG036380, gene_TRIDC1BG041460 ...
gene_TRIDC3AG026020, gene_TRIDC3BG029740, gene_TRIDC7AG017470, gene_TRIDC7BG006730
Poaceae Triticum aestivum 9 TraesCS1A02G241300.1, TraesCS1B02G253100.2 ...
TraesCS1D02G241200.1, TraesCS3A02G187000.1, TraesCS3B02G216400.1, TraesCS3D02G190800.1, TraesCS7A02G143900.1, TraesCS7B02G046000.1, TraesCS7D02G145400.1
Poaceae Zea mays 3 Zm00001eb287070_P001, Zm00001eb332930_P001 ...
Zm00001eb374910_P001
Poaceae Zoysia japonica 2 nbis-gene-23691, nbis-gene-5030
Poaceae Zoysia macrostachya 4 Zma_g28156, Zma_g29219, Zma_g7343, Zma_g9675
Portulacaceae Portulaca oleracea 8 evm.TU.LG10.396, evm.TU.LG17.393, evm.TU.LG18.1690 ...
evm.TU.LG19.1003, evm.TU.LG19.1005, evm.TU.LG20.194, evm.TU.LG24.1010, evm.TU.LG24.1012
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g04030, gene.Posoc02g23860, gene.Posoc03g12120 ...
gene.Posoc05g13690
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_10_RagTag.876, evm.TU.Scaffold_11_RagTag.73 ...
evm.TU.Scaffold_13_RagTag.987
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-13599, nbisL1-mrna-7168
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-12484, nbisL1-mrna-17179, nbisL1-mrna-4876
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-14495, nbisL1-mrna-16350, nbisL1-mrna-9127
Rhizophoraceae Kandelia candel 2 add.evm.TU.utg000005l.139, evm.TU.utg000004l.192
Rhizophoraceae Kandelia obovata 2 Maker00003935, Maker00015504
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-255, nbisL1-mrna-3753, nbisL1-mrna-4494
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-20807, nbisL1-mrna-22063, nbisL1-mrna-7835
Salicaceae Populus euphratica 6 populus_peu01786, populus_peu04723, populus_peu12954 ...
populus_peu35056, populus_peu36032, populus_peu37280
Solanaceae Lycium barbarum 3 gene-LOC132600474, gene-LOC132636155, gene-LOC132643650
Solanaceae Solanum chilense 2 SOLCI006039000, SOLCI006236600
Solanaceae Solanum pennellii 2 gene-LOC107003047, gene-LOC107026711
Tamaricaceae Reaumuria soongarica 3 gene_14393, gene_7304, gene_9765
Tamaricaceae Tamarix chinensis 2 TC01G1445, TC01G3908
Zosteraceae Zostera marina 5 Zosma01g41290.v3.1, Zosma01g41300.v3.1, Zosma03g01870.v3.1 ...
Zosma06g16050.v3.1, Zosma06g16100.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.